HitBoost: Survival Analysis via a Multi-Output Gradient Boosting Decision Tree Method

LightGBM: A Highly Efficient Gradient Boosting Decision Tree

Gradient Boosting Decision Tree (GBDT) is a popular machine learning algorithm, and has quite a few effective implementations such as XGBoost and pGBRT. Although many engineering optimizations have been adopted in these implementations, the efficiency and scalability are still unsatisfactory when the feature dimension is high and data size is large. A major reason is that for each feature, they...

Multi-scale encoding of amino acid sequences for predicting protein interactions using gradient boosting decision tree

Nowadays a number of computational approaches have been developed to effectively and accurately predict protein interactions. However, most of these methods typically perform worse when other biological data sources (e.g., protein structure information, protein domains, or gene neighborhoods information) are not available. In the present work, we propose a method for predicting protein interact...

Estimating Surface Downward Shortwave Radiation over China Based on the Gradient Boosting Decision Tree Method

Downward shortwave radiation (DSR) is an essential parameter in the terrestrial radiation budget and a necessary input for models of land-surface processes. Although several radiation products using satellite observations have been released, coarse spatial resolution and low accuracy limited their application. It is important to develop robust and accurate retrieval methods with higher spatial ...

A Gradient Boosting Algorithm for Survival Analysis via Direct Optimization of Concordance Index

Survival analysis focuses on modeling and predicting the time to an event of interest. Many statistical models have been proposed for survival analysis. They often impose strong assumptions on hazard functions, which describe how the risk of an event changes over time depending on covariates associated with each individual. In particular, the prevalent proportional hazards model assumes that co...

A Simpler Analysis of the Multi-way Branching Decision Tree Boosting Algorithm